MitoFish, MitoAnnotator, and MiFish Pipeline Papers

MBE Cover

If you use MiFish Pipeline in your projects, please cite:
  • Zhu T, Sato Y, Sado T, Miya M, and Iwasaki W. 2023. MitoFish, MitoAnnotator, and MiFish Pipeline: Updates in ten years. Mol Biol Evol, 40:msad035.
  • Sato Y, Miya M, Fukunaga T, Sado T, Iwasaki W. 2018. MitoFish and MiFish Pipeline: A Mitochondrial Genome Database of Fish with an Analysis Pipeline for Environmental DNA Metabarcoding. Mol Biol Evol 35:1553-1555.
  • Iwasaki W, Fukunaga T, Isagozawa R, Yamada K, Maeda Y, Satoh TP, Sado T, Mabuchi K, Takeshima H, Miya M, et al. 2013. MitoFish and MitoAnnotator: a mitochondrial genome database of fish with an accurate and automatic annotation pipeline. Mol Biol Evol 30:2531-2540.
If you use MiFish Primers in your projects, please cite:
  • Miya M, Sato Y, Fukunaga T, Sado T, Poulsen JY, Sato K, Minamoto T, Yamamoto S, Yamanaka H, Araki H, et al. 2015. MiFish, a set of universal PCR primers for metabarcoding environmental DNA from fishes: detection of more than 230 subtropical marine species. R Soc Open Sci 2:150088.

MitoFish Information:

Complete mtDNA Data:
Complete + Partial Data: